polecat

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View the Project on GitHub artic-network/polecat

polecat

Phylogenetic Overview & Local Epidemiological Cluster Analysis Tool

polecat is a tool developed with ‘real-time’ genomics in mind.

Using a background phylogeny, such as the large phylogeny available through the COG-UK infrastructure on CLIMB, polecat will identify and flag clusters based on various configurable statistics.

An interactive, customisable report is generated, summarising information about the clusters of interest.

polecat documentation

polecat was created by the Rambaut Group, Edinburgh University